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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs9379897 chr6:26601526 T/C ZFP57 chr6:29640169-29648887:- 0.54 6.08 2.46E-9 Box Plot
THCA rs9379899 chr6:26603015 T/A ZFP57 chr6:29640169-29648887:- 0.54 6.08 2.46E-9 Box Plot
THCA rs9379900 chr6:26603811 A/C ZFP57 chr6:29640169-29648887:- 0.56 6.14 1.73E-9 Box Plot
THCA rs9379901 chr6:26603866 T/C ZFP57 chr6:29640169-29648887:- 0.55 6.1 2.24E-9 Box Plot
THCA rs9379902 chr6:26606512 G/A ZNF322B chr9:99957633-99961910:- 0.74 15.3 2.69E-43 Box Plot
THCA rs9379903 chr6:26606579 T/C ZNF322B chr9:99957633-99961910:- 0.72 14.57 4.53E-40 Box Plot
THCA rs9379913 chr6:26710903 C/T ZNF322B chr9:99957633-99961910:- -0.62 -7.9 1.97E-14 Box Plot
THCA rs9379976 chr6:27298200 T/C ZNF322B chr9:99957633-99961910:- -0.42 -6.12 2.0E-9 Box Plot
THCA rs9379977 chr6:27298279 T/C ZNF322B chr9:99957633-99961910:- -0.42 -6.17 1.43E-9 Box Plot
THCA rs9379978 chr6:27298629 G/A ZNF322B chr9:99957633-99961910:- -0.42 -6.15 1.6E-9 Box Plot
THCA rs9380047 chr6:28037893 G/T BTN3A2 chr6:26365387-26378548:+ -0.29 -6.11 2.11E-9 Box Plot
THCA rs9380049 chr6:28048535 A/G BTN3A2 chr6:26365387-26378548:+ -0.29 -6.11 2.11E-9 Box Plot
THCA rs9380050 chr6:28048538 A/G BTN3A2 chr6:26365387-26378548:+ -0.29 -6.11 2.11E-9 Box Plot
THCA rs9380054 chr6:28067537 G/A BTN3A2 chr6:26365387-26378548:+ -0.29 -6.11 2.11E-9 Box Plot
THCA rs9380055 chr6:28081629 A/G BTN3A2 chr6:26365387-26378548:+ -0.29 -6.1 2.25E-9 Box Plot